PanGEA 1.0
Online manual

Introduction

• Introduction
• System requirements
• Installation
• License

EST mapping with PanGEA-BlastN

• Introduction
• Quick guide
• Search report
• The alignment file

Manage Pairwise alignments

• Introduction
• Quick guide
• Analysis in detail
• Export

Identify SNPs

• Introduction
• Quick guide - 'de novo'
• Quick guide - from SNP-sites
• SNPs and SNP-sites
• SNP Quality
• SNP and SNP-site files

Manage SNPs

• Introduction
• Quick guide
• Analysis - Gene centered
• Analysis - SNP-site centered
• SNP-benchmarks
• Export

Secondary Tasks

• Change Settings
• Misc - Trim sequences
• Misc - Batch modify
• Misc - Convert lowercase
• Misc - Identify halfSNPs
• Misc - Export ambiguous

PanGEA-Main
Bioinformatics-Main